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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_63159_63563_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
63159 - 63563

Intron Length:
405

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGGAG

5'SS Class:
major

3'SS Sequence:
CTGTCTTCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTGAC

U12 Branch Point Sequence:
TGTGTCTGACTC

Flanking Amino Acid:
KRKWTPLHAAAANGNTDSLH

Intron Amino Acid Position:
678

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.2
63.9
42.4

Major BPS
63.7
0.34
1.2
57
41.8

Major PPT
76.8
0.6
0.8
69.1
37

Minor 5ss
34.1
-1.8
3.6
45.9
49.3

Minor BPS
47.5
-0.2
1.8
59.08
40.5

Associated Gene:

Gene:
ANKRD52

Ensembl Gene ID:

Chromosome:
PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52190 - 69525
17336