Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_63869_64108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63869 - 64108

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GAGGTCTGACCT

Flanking Amino Acid:

KRGRTALHRGAVTGCEDCLA

Intron Amino Acid Position:

747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

63.7

0.34

1.2

41.8

Major PPT

66.8

0.38

0.9

59.7

35.6

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

45.6

-0.2

1.8

58.12

44.6

Associated Gene:

Gene:

ANKRD52

Ensembl Gene ID:

ENSAPLG00000016095

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016884

52190 - 69525

17336