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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_64329_65100_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
64329 - 65100

Intron Length:
772

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTAAGGACC

5'SS Class:
strong_major

3'SS Sequence:
TCTCTTCTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
ATGTGTTTATGT

Flanking Amino Acid:
YSPMHWASYSGHEDCLELLL

Intron Amino Acid Position:
820

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
70.8
39.4

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
84.3
0.77
0.7
79.4
26.2

Minor 5ss
34
-1.8
3.1
45.4
42.5

Minor BPS
45.8
-0.2
2.2
65.34
45.8

Associated Gene:

Gene:
ANKRD52

Ensembl Gene ID:

Chromosome:
PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52190 - 69525
17336