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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_65189_65714_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
65189 - 65714

Intron Length:
526

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTAAGTGGT

5'SS Class:
major

3'SS Sequence:
GTCCCCGCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTAAC

U12 Branch Point Sequence:
CCTGATCTAACT

Flanking Amino Acid:
GNPFTPLHCAVINNQDGTAE

Intron Amino Acid Position:
849

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
69.1
41.9

Major BPS
75.8
0.64
0.9
75.6
25.3

Major PPT
69.1
0.43
0.9
61.5
34.9

Minor 5ss
36.4
-1.5
3.4
50
46.3

Minor BPS
47.2
-0.1
2
64.85
45.8

Associated Gene:

Gene:
ANKRD52

Ensembl Gene ID:

Chromosome:
PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52190 - 69525
17336