About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_747_843_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
747 - 843

Intron Length:
97

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGGGG

5'SS Class:
major

3'SS Sequence:
CCCCCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCGC

U12 Branch Point Sequence:
TTTTCGCCCCCC

Flanking Amino Acid:
HVPPDPTEEQGVDGDASVHD

Intron Amino Acid Position:
93

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.7
0.32
1.3
49.8
46.9

Major BPS
35.6
-0.9
4.2
77.4
37.4

Major PPT
66.9
0.38
0.7
57.1
27.1

Minor 5ss
33.1
-1.9
3.7
46.9
48.5

Minor BPS
28.7
-1.6
3.8
59.14
45.9

Associated Gene:

Gene:
TIMELESS

Ensembl Gene ID:

Chromosome:
PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

257 - 6162
5906

257 - 6162
5906