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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008100.1_78160_79105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78160 - 79105

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACACAG

U12 Branch Point Sequence:

GGACACAGGACG

Flanking Amino Acid:

IHNLTDGLAIGASFSHSLSS

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

57.9

41.8

Major BPS

41.4

-0.5

1.5

46.7

38.9

Major PPT

81.5

0.71

0.7

76.9

25.1

Minor 5ss

31.7

-2.1

3.3

41.6

45.3

Minor BPS

38.4

-1

1.8

38.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026416

Chromosome:

PEDO01008100.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035542

77590 - 79774

2185