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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008163.1_1551_2338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1551 - 2338

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATCCTTATGT

Flanking Amino Acid:

LIDKARVETQNHWFTYNETM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.74

0.8

77.8

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

61.4

0.44

1.9

78.2

43.7

Associated Gene:

Gene:

PSMA5

Ensembl Gene ID:

ENSAPLG00000021024

Chromosome:

PEDO01008163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045658

185 - 2636

2452