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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008163.1_2435_2579_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2435 - 2579

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCCAGCCAC

5'SS Class:

weak_major

3'SS Sequence:

GATCGGTGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

CCTTGCAGATCG

Flanking Amino Acid:

WGGWEACLGAVTPGFPLLAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

49.8

43.7

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

44.6

-0.3

1.7

45.9

45.5

Minor 5ss

25.4

-2.8

3.9

39.3

Minor BPS

38.9

-0.9

2.2

44.68

47.1

Associated Gene:

Gene:

PSMA5

Ensembl Gene ID:

ENSAPLG00000021024

Chromosome:

PEDO01008163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045658

185 - 2636

2452