Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008168.1_3092_3127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3092 - 3127

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACT|GCAGGTAAC

5'SS Class:

major

3'SS Sequence:

GTGCGCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTAAC

U12 Branch Point Sequence:

CTGCAGGTAACG

Flanking Amino Acid:

SALQSLLRHDSRCTATLPTV

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.5

66.9

41.3

Major BPS

50.5

0.01

1.3

53.1

40.5

Major PPT

65.7

0.35

57.9

38.5

Minor 5ss

27.2

-2.6

45.5

42.9

Minor BPS

37.9

-1

2.6

45.21

46.8

Associated Gene:

Gene:

ANGPTL4

Ensembl Gene ID:

ENSAPLG00000011184

Chromosome:

PEDO01008168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041376

2389 - 4548

2160