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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008197.1_90_768_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
90 - 768

Intron Length:
679

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGCGGC

5'SS Class:
strong_major

3'SS Sequence:
CCGTGTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAC

U12 Branch Point Sequence:
CCCCTTTGCACG

Flanking Amino Acid:
RHYINLVTRQRYGKRASPEA

Intron Amino Acid Position:
63

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.2
0.78
0.9
66.6
39.6

Major BPS
65.1
0.38
1.4
77.4
37.4

Major PPT
68
0.41
0.9
61.3
35.1

Minor 5ss
31.2
-2.1
3.3
41.1
45.6

Minor BPS
39.8
-0.9
1.8
35.97
40.2

Associated Gene:

Gene:
PYY

Ensembl Gene ID:

Chromosome:
PEDO01008197.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 1255
1235