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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_120385_121460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120385 - 121460

Intron Length:

1076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TCAAACATAATT

Flanking Amino Acid:

RVNNKATTRALNAQKEIQQD

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

76.9

0.61

0.8

70.8

33.5

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

49.3

0.03

1.8

67.84

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019282

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036320

114596 - 125697

11102

ENSAPLT00000033220

114596 - 125697

11102