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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_196237_198323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

196237 - 198323

Intron Length:

2087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTCTCCCCACCT

Flanking Amino Acid:

EKQMEINKKREELQAQGRAQ

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

83.2

30.8

Major BPS

72.5

0.56

1.2

39.9

Major PPT

85.1

0.79

0.8

80.2

31.8

Minor 5ss

37.5

-1.4

48.1

47.6

Minor BPS

49.7

0.06

2.2

76.96

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019915

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025319

174261 - 202168

27908

ENSAPLT00000018901

174261 - 260418

86158