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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_198369_256965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

198369 - 256965

Intron Length:

58597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CGCTTCTCACTC

Flanking Amino Acid:

QGRAQEDAEKESLKKENELL

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

77.5

32.8

Major BPS

0.87

0.8

85.6

Major PPT

0.88

0.6

84.2

23.7

Minor 5ss

30.4

-2.2

3.2

31.7

42.6

Minor BPS

45.5

-0.3

1.8

50.08

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019915

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033964

174261 - 260418

86158

ENSAPLT00000028460

174261 - 260418

86158