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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_200930_201176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

200930 - 201176

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTTCTG

5'SS Class:

major

3'SS Sequence:

TTCTTCTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

TTCTTCTCAACA

Flanking Amino Acid:

AQKTVTRKGKVLLQQRLTLS

Intron Amino Acid Position:

838

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.3

57.6

46.7

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

80.9

0.69

0.8

77.5

29.8

Minor 5ss

32.9

-2

3.1

41.8

44.7

Minor BPS

71.3

0.66

1.5

79.1

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019915

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025319

174261 - 202168

27908