Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_276034_276126_F

Intron Information:

Intron Rank:

129272

Intron Class:

major

Intron Phase:

Intron Coordinates:

276034 - 276126

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGATGT

5'SS Class:

major

3'SS Sequence:

TTGTCCACAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCATAA

U12 Branch Point Sequence:

TTGTCCACAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.5

39.2

Major BPS

52.4

0.06

1.1

49.2

36.2

Major PPT

69.2

0.43

64.6

36.4

Minor 5ss

32.8

-2

3.4

47.1

48.3

Minor BPS

49.3

-0

2.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019542

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043714

267043 - 278498

11456

ENSAPLT00000020966

267043 - 278498

11456