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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_276496_278205_F

Intron Information:

Intron Rank:

129274

Intron Class:

major

Intron Phase:

Intron Coordinates:

276496 - 278205

Intron Length:

1710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

GTGATGTCACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

92.4

0.95

0.6

88.1

21.7

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

38.2

-0.8

2.2

52.73

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019542

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043714

267043 - 278498

11456

ENSAPLT00000024973

267043 - 278498

11456

ENSAPLT00000020966

267043 - 278498

11456