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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_298173_304306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

298173 - 304306

Intron Length:

6134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TTATACTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

73.4

43.3

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

83.3

0.75

0.9

80.8

36.8

Minor 5ss

32.5

-2

3.4

47.7

47.8

Minor BPS

67.5

0.63

1.8

86.1

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017596

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039667

293235 - 304713

11479