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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_325364_326025_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

325364 - 326025

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TGAACATGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTGCATTGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

50.6

0.02

1.2

49.5

42.9

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

54.1

0.12

1.6

66.89

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010865

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047359

313990 - 326160

12171

ENSAPLT00000044399

313990 - 326160

12171

ENSAPLT00000011304

313990 - 326160

12171