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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_433835_465474_F

Intron Information:

Intron Rank:

127678

Intron Class:

major

Intron Phase:

Intron Coordinates:

433835 - 465474

Intron Length:

31640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

TGCATCTCAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

82.5

0.73

0.8

76.5

32.1

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

46.7

-0.2

1.8

55.9

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018839

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028313

433508 - 466153

32646