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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_70381_70820_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70381 - 70820

Intron Length:
440

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATCCTT

5'SS Class:
strong_major

3'SS Sequence:
GATGTCTCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGGAT

U12 Branch Point Sequence:
CCTTCCTGAGCA

Flanking Amino Acid:
HGEDASAICSESGITISTSV

Intron Amino Acid Position:
1245

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.2
0.71
1
74.6
41.7

Major BPS
58.9
0.22
1.5
59.3
47.1

Major PPT
73.9
0.54
0.9
66.3
40.4

Minor 5ss
43.9
-0.7
3.2
65.5
45.6

Minor BPS
58.4
0.26
1.8
68.12
44.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11701 - 71849
60149