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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_70955_71060_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70955 - 71060

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTGTGC

5'SS Class:

weak_major

3'SS Sequence:

GTGAACTGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

CTGATGTGAACT

Flanking Amino Acid:

DDGWDLREAKEQKGLSLNVK

Intron Amino Acid Position:

1290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

49.7

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

57.4

0.17

1.1

49.5

43.5

Minor 5ss

32.1

-2

3.3

42.4

44.5

Minor BPS

46.2

-0.2

2.2

64.75

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010096

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024211

11701 - 71849

60149