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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008204.1_82356_85360_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82356 - 85360

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCCATGACA

5'SS Class:

weak_major

3'SS Sequence:

ATACCAAGAGTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCTATTTTATTT

Flanking Amino Acid:

AVECSGTANVSPLRLMDGPN

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.4

37.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

49.1

-0

42.4

36.5

Minor 5ss

20.1

-3.4

3.6

28.5

35.6

Minor BPS

55.5

0.25

1.6

71.35

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010298

Chromosome:

PEDO01008204.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010747

81988 - 90967

8980