Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008235.1_2503_3200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2503 - 3200

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGAGA

5'SS Class:

major

3'SS Sequence:

CTGTGCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAC

U12 Branch Point Sequence:

ACCCCCCCACCT

Flanking Amino Acid:

EDLHDMLASMGKNPTDEYLE

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

65.7

41.7

Major BPS

47.2

-0.1

52.2

32.7

Major PPT

63.7

0.31

58.4

38.4

Minor 5ss

25.7

-2.8

2.9

22.2

37.3

Minor BPS

42.1

-0.5

56.77

45.3

Associated Gene:

Gene:

MYL9

Ensembl Gene ID:

ENSAPLG00000025519

Chromosome:

PEDO01008235.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037901

250 - 3798

3549