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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008236.1_2395_2489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2395 - 2489

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTAAAAG

5'SS Class:

major

3'SS Sequence:

TCTCTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

GGGACGTGAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.2

58.8

39.8

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

78.1

0.63

0.8

72.5

32.2

Minor 5ss

34.6

-1.7

2.8

40.2

45.6

Minor BPS

43.6

-0.5

2.1

49.67

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019478

Chromosome:

PEDO01008236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027691

2052 - 7942

5891