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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008245.1_2197_2247_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

2197 - 2247

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTCTCCTAA

5'SS Class:

weak_minor

3'SS Sequence:

CGGGCACCTAGAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CTACGAA

U12 Branch Point Sequence:

CTACGAAGAAGC

Flanking Amino Acid:

QDPQEVALTSLGRAPGTIHV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

43.3

-0.4

1.4

38.9

37.4

Major BPS

46.2

-0.2

1.3

42.2

38.7

Major PPT

45.5

-0.2

1.7

42.9

37.8

Minor 5ss

0.37

2.2

73.7

Minor BPS

32.4

-1.3

2.1

39.88

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017165

Chromosome:

PEDO01008245.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020775

1920 - 6534

4615