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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008253.1_775_901_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
775 - 901

Intron Length:
127

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGGGGC

5'SS Class:
major

3'SS Sequence:
GGTGCCCCCGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAC

U12 Branch Point Sequence:
GGGACGCTGACG

Flanking Amino Acid:
SQVTLYVLEKVPTRYGVVLG

Intron Amino Acid Position:
152

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1
65.7
40

Major BPS
53.9
0.1
1.2
46.4
38.9

Major PPT
63.3
0.3
0.9
54.8
36.5

Minor 5ss
28.5
-2.5
3.6
41.2
45.5

Minor BPS
39.5
-0.9
2.3
41.79
42.6

Associated Gene:

Gene:
MPZ

Ensembl Gene ID:

Chromosome:
PEDO01008253.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

60 - 1142
1083