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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008259.1_117_988_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117 - 988

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGGCTT

5'SS Class:

major

3'SS Sequence:

TGTCTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGGTAAC

U12 Branch Point Sequence:

CAGTCGGTAACC

Flanking Amino Acid:

ARDTRRLGATIDVEHSHVRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

67.5

43.5

Major BPS

48.8

-0

1.3

50.7

41.5

Major PPT

86.1

0.81

0.8

80.7

31.3

Minor 5ss

38.9

-1.3

3.6

62.2

43.2

Minor BPS

45.4

-0.3

2.6

58.84

46.2

Associated Gene:

Gene:

RRAGB

Ensembl Gene ID:

ENSAPLG00000014128

Chromosome:

PEDO01008259.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014730

21 - 8439

8419

ENSAPLT00000041693

21 - 8846

8826