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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008259.1_1697_3384_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1697 - 3384

Intron Length:

1688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

TTTTACTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

DLVQEDQRDLIFKEREEDLR

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

64.9

41.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

84.8

0.78

0.8

77.2

36.7

Minor 5ss

34.4

-1.8

2.9

39.9

40.3

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

RRAGB

Ensembl Gene ID:

ENSAPLG00000014128

Chromosome:

PEDO01008259.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041693

21 - 8846

8826

ENSAPLT00000014730

21 - 8439

8419