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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008259.1_4554_6286_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4554 - 6286

Intron Length:

1733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAATACA

5'SS Class:

major

3'SS Sequence:

TTCTGCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

AAATCAATGACT

Flanking Amino Acid:

VLLFERATFLVISHYQCKEQ

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

71.8

32.7

Major BPS

62.4

0.31

32.1

Major PPT

82.3

0.73

0.8

73.3

37.2

Minor 5ss

30.1

-2.3

2.6

31.2

37.1

Minor BPS

49.7

0.06

1.9

69.95

Associated Gene:

Gene:

RRAGB

Ensembl Gene ID:

ENSAPLG00000014128

Chromosome:

PEDO01008259.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041693

21 - 8846

8826

ENSAPLT00000014730

21 - 8439

8419