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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008266.1_1335_1413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1335 - 1413

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAC

U12 Branch Point Sequence:

CCCCCCTGACCC

Flanking Amino Acid:

FTEEFLDQNKAREAELRRLR

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

61.5

0.29

1.4

63.1

44.5

Major PPT

70.6

0.46

66.6

35.6

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

46.9

-0.2

1.8

52.11

45.1

Associated Gene:

Gene:

HMG20B

Ensembl Gene ID:

ENSAPLG00000005528

Chromosome:

PEDO01008266.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005721

589 - 3645

3057