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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008266.1_3557_3592_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3557 - 3592

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGTGATGT

5'SS Class:

weak_major

3'SS Sequence:

AAAAACCAGGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GGATGCTAAAAA

Flanking Amino Acid:

GSCRALGSHRAESGCAGLSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.07

1.3

52.1

41.6

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

39.3

-0.6

1.6

29.7

36.3

Minor 5ss

41.2

-1

50.9

Minor BPS

45.5

-0.3

2.1

55.24

42.9

Associated Gene:

Gene:

HMG20B

Ensembl Gene ID:

ENSAPLG00000005528

Chromosome:

PEDO01008266.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005721

589 - 3645

3057