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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008272.1_1520_1860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1520 - 1860

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTTTCCTGTACT

Flanking Amino Acid:

PYARQDKKDKSRAPISAKLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

77.8

0.69

78.2

31.8

Major PPT

72.3

0.5

0.9

66.7

39.3

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

73.4

0.82

1.8

93.48

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019760

Chromosome:

PEDO01008272.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030731

1253 - 2146

894