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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008297.1_1496_1563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1496 - 1563

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCGCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGCTCCACAGCC

Flanking Amino Acid:

PHFHHELVYEAVVMVLEGSG

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

64.4

0.33

0.9

57.2

33.4

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

44.2

-0.4

53.69

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017140

Chromosome:

PEDO01008297.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033753

42 - 2043

2002