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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008297.1_1904_1991_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1904 - 1991

Intron Length:
88

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGGGGA

5'SS Class:
major

3'SS Sequence:
TCCTCCTCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTCAT

U12 Branch Point Sequence:
TCATCCTCATCC

Flanking Amino Acid:
TRALRDACPARGRKRFVSEG

Intron Amino Acid Position:
391

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
64.2
42.1

Major BPS
82.3
0.8
0.9
81.8
30.8

Major PPT
77.7
0.62
0.7
72.5
25.6

Minor 5ss
27.5
-2.6
3.6
38.1
46.8

Minor BPS
56.9
0.2
1.9
67.61
43.7

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01008297.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

42 - 2043
2002