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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008297.1_886_947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

886 - 947

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CCGTCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CGGCCCTCACCC

Flanking Amino Acid:

YKGRVDCEHARAALDRAAVL

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.47

0.8

64.9

30.6

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

46.4

-0.2

1.9

52.79

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017140

Chromosome:

PEDO01008297.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033753

42 - 2043

2002