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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008321.1_709_5439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

709 - 5439

Intron Length:

4731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

CTCTCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCCAC

U12 Branch Point Sequence:

GTAGCCACCACC

Flanking Amino Acid:

QEPLSVTYGIGDPEHDSEGR

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.9

39.3

Major BPS

47.8

-0.1

1.3

56.1

40.7

Major PPT

74.3

0.55

0.7

65.5

30.4

Minor 5ss

28.3

-2.5

36.1

40.2

Minor BPS

41.7

-0.6

2.2

53.45

43.6

Associated Gene:

Gene:

APEX1

Ensembl Gene ID:

ENSAPLG00000019323

Chromosome:

PEDO01008321.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022864

21 - 5890

5870