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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008337.1_3073_4628_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3073 - 4628

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCACGAGAA

5'SS Class:

weak_major

3'SS Sequence:

GCGACATCGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGACAT

U12 Branch Point Sequence:

GCGACATCGACA

Flanking Amino Acid:

MIIKGVVIRKTLGMCP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.4

51.1

42.3

Major BPS

-0.3

1.3

48.6

45.1

Major PPT

53.5

0.08

1.1

46.3

40.5

Minor 5ss

20.3

-3.4

4.1

29.1

43.5

Minor BPS

44.2

-0.4

1.8

49.5

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016984

Chromosome:

PEDO01008337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039397

3053 - 5853

2801