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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008337.1_5128_5323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5128 - 5323

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

TGTGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAGCAG

U12 Branch Point Sequence:

GCGGCCAGCAGC

Flanking Amino Acid:

IWELLLKYRKGRTIVLSTHY

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

62.8

37.7

Major BPS

-0.8

1.5

40.7

Major PPT

0.43

0.9

58.8

38.3

Minor 5ss

23.6

-3

3.2

21.4

37.4

Minor BPS

33.9

-1.2

2.1

36.23

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016984

Chromosome:

PEDO01008337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039397

3053 - 5853

2801

ENSAPLT00000023367

22 - 5846

5825