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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008337.1_5445_5780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5445 - 5780

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTGGGCAC

5'SS Class:

major

3'SS Sequence:

AGCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGCAC

U12 Branch Point Sequence:

GTGCCCCGCAGA

Flanking Amino Acid:

CCGSPLFLKARVHRLCPRGP

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

59.8

42.2

Major BPS

-0.5

1.3

44.4

38.7

Major PPT

64.5

0.33

0.9

54.2

35.9

Minor 5ss

15.7

-4

3.7

23.5

37.5

Minor BPS

37.4

-0.9

2.2

47.32

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016984

Chromosome:

PEDO01008337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039397

3053 - 5853

2801