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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008351.1_917_1082_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

917 - 1082

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTGTTTCTT

5'SS Class:

weak_major

3'SS Sequence:

AAACATCATCTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

GGAACCTTAAAC

Flanking Amino Acid:

STGKLRTLEKVSNALTVARD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.1

56.3

42.2

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

55.2

0.12

41.4

Minor 5ss

42.9

-0.8

59.2

45.3

Minor BPS

61.1

0.33

1.5

63.8

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016490

Chromosome:

PEDO01008351.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039557

74 - 1122

1049