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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008352.1_250_545_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

250 - 545

Intron Length:

296

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

GAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

AAAAACCCCAAGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

AAATCCTAAAAT

Flanking Amino Acid:

VGTQQLSPTEVFPVLVGDVD

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

65.3

0.38

71.6

30.1

Major PPT

29.5

-1.1

30.9

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

59.9

0.39

1.8

74.27

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025653

Chromosome:

PEDO01008352.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045364

21 - 1387

1367