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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008391.1_290_376_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

290 - 376

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGCGCG

5'SS Class:

major

3'SS Sequence:

CGACACCATCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACGTCAC

U12 Branch Point Sequence:

ACCACGTCACCC

Flanking Amino Acid:

RIPTGKELIEELKDQAMQKG

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

53.3

44.1

Major BPS

53.6

0.09

1.2

39.5

Major PPT

58.7

0.2

47.5

40.2

Minor 5ss

38.2

-1.3

3.1

47.6

Minor BPS

38.9

-0.8

2.3

45.17

43.3

Associated Gene:

Gene:

RPUSD1

Ensembl Gene ID:

ENSAPLG00000012316

Chromosome:

PEDO01008391.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039120

21 - 1712

1692