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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008391.1_878_957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

878 - 957

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

GATCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

CGGAGCTGACCC

Flanking Amino Acid:

THMMCIDGTQGCENPKPCQS

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

0.52

65.6

40.6

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

40.1

-0.7

44.36

43.4

Associated Gene:

Gene:

RPUSD1

Ensembl Gene ID:

ENSAPLG00000012316

Chromosome:

PEDO01008391.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039120

21 - 1712

1692

ENSAPLT00000012816

21 - 1712

1692