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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008403.1_244_2424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

244 - 2424

Intron Length:

2181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

ACCCCCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CCCTCCCCAATT

Flanking Amino Acid:

LLQAVLLMSSDRTGLICVDK

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

70.5

38.9

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

75.5

0.57

0.8

68.6

30.9

Minor 5ss

29.5

-2.3

3.4

38.5

46.7

Minor BPS

48.6

-0

1.9

64.35

46.4

Associated Gene:

Gene:

THRA

Ensembl Gene ID:

ENSAPLG00000019016

Chromosome:

PEDO01008403.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020734

2 - 3697

3696

ENSAPLT00000030765

5 - 3668

3664