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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008403.1_2684_2771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2684 - 2771

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGGG

5'SS Class:

major

3'SS Sequence:

CCGTGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AAAACCCCATCC

Flanking Amino Acid:

FAKKLPMFSELPCEDQIILL

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

61.1

43.7

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

0.41

0.9

61.3

35.1

Minor 5ss

-2.5

3.5

37.8

47.1

Minor BPS

41.4

-0.6

49.55

39.6

Associated Gene:

Gene:

THRA

Ensembl Gene ID:

ENSAPLG00000019016

Chromosome:

PEDO01008403.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030765

5 - 3668

3664

ENSAPLT00000020734

2 - 3697

3696