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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008403.1_2919_3357_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2919 - 3357

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

CAACTCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCAAT

U12 Branch Point Sequence:

TCCCCCCCAACT

Flanking Amino Acid:

SHWKQKRKFLPEDIGQSPMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

48.8

-0

1.3

56.3

37.4

Major PPT

64.8

0.33

0.9

54.7

35.9

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

50.2

0.08

1.9

70.64

45.7

Associated Gene:

Gene:

THRA

Ensembl Gene ID:

ENSAPLG00000019016

Chromosome:

PEDO01008403.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030765

5 - 3668

3664

ENSAPLT00000020734

2 - 3697

3696