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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008409.1_4661_12710_F

Intron Information:

Intron Rank:

135309

Intron Class:

major

Intron Phase:

Intron Coordinates:

4661 - 12710

Intron Length:

8050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TGTTCTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.6

0.69

0.8

78.7

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

82.1

83.91

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022785

Chromosome:

PEDO01008409.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032632

3813 - 13159

9347