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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008412.1_3516_4129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3516 - 4129

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCGGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

GGGTCAGCACCC

Flanking Amino Acid:

HELTHAFDDQGREYDKEGNL

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

59.9

0.25

1.3

70.1

Major PPT

68.2

0.41

0.9

61.2

35.1

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

36.3

-1

2.3

45.35

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018560

Chromosome:

PEDO01008412.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017449

2872 - 8043

5172

ENSAPLT00000017956

2846 - 8043

5198