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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008480.1_1175_3586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1175 - 3586

Intron Length:

2412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AACCCCTCAGCA

Flanking Amino Acid:

QHVAHGATGKGNDQVRFELT

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

77.9

0.63

73.9

41.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

48.3

-0.1

1.8

57.31

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010701

Chromosome:

PEDO01008480.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011191

1058 - 5436

4379