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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008480.1_9457_9706_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9457 - 9706

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGAGTGCG

5'SS Class:

major

3'SS Sequence:

AGGGAGTTTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

TCTGCAGGGAGT

Flanking Amino Acid:

CPPGMVLLPEDHCVPKSLPK

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.62

1.2

70.8

38.2

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

45.4

-0.2

1.7

42.9

46.7

Minor 5ss

16.8

-3.8

3.4

15.2

28.4

Minor BPS

36.5

-0.9

2.4

56.43

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018857

Chromosome:

PEDO01008480.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020987

8043 - 10339

2297